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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912346.1_cds_XP_016462420.1_55651
CDS Infomation

[gene=LOC107785592] [db_xref=GeneID:107785592] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016462420.1] [location=complement(join(5435..5922,6777..6978,7076..7258,7486..7590,8262..8505,11683..11828,12192..12282,13044..13248,13869..14091))] [gbkey=CDS]
Sequence

ATGCAGAGGATAAAAATGGGATTTTTGATGAGAATTCTAGTGTTTTTTTGTTGGATGATA
TTAACAAAAGCAGAGTACATGAAATACAAAGATCCAAACAAGCCATTAGGCAGAAGAATC
AAAGATTTAATGAGCAGAATGACTTTGGAGGAAAAAATTGGCCAAATGATACAAATTGAT
CGTACAGTTGCTACTCCTGAGGCCATGAAGAAGTATTATATAGGGAGTGTATTGAGTGGA
GGAGGAAGTGTGCCAAAGAAAGAAGCATCAGCAGAAAATTGGATTGATATGATAAATGGT
TTTCAAAAGGGTTCATTATCAACTCGTCTTGGGATTCCGATGATTTATGGGATTGATGCA
GTTCATGGCAACAATAATGTTTATAAAGCTACCATTTTTCCTCACAATGTTGGTCTTGGA
GTAACCAGGGATCCTCAATTGATCAAGAAGATTGGAGCTGCAACTGCATTAGAAGCTAGA
GCAACTGGAATTCCTTATGTTTTTGCACCTTGTCTTGCGGTTTGCAGAGATCCAAGATGG
GGTAGATGTTATGAGAGCTATAGTGAAGATCCAAACATTGTTAGGGCAATGAGTGAAATG
GTTCCTGGTTTACAAGGAGATGTTCCTTCTAATGGTAGATTAGGAGTCCCTTTTGTTGCT
AACAAGCAAAAGGTGGCTGCTTGTGCCAAGCATTATGTAGGTGATGGTGGGACAGTAAAA
GGCATAAATGAGAACAACACAATAATTGATAGACATGGTTTGCTTAGTATCCATATGGCA
GGTTACTATAATTCAATTATCAAGGGTGTTGCTACTGTTATGGTTTCTTATTCAAGTTGG
AATGGTCTCAGAATGCATGGTAATAGAGAAATGGTCACTGGTTTTCTTAAAGGCACACTT
CGTTTCAGAGGCTTTGTTATTTCAGATTGGGCAGGAATTGACAAGCTTACTTATCCTTGG
CATGCAAACTATACATATTCCATTCTTGAAGGTGTCAATGCTGGCATTGACATGGTAATG
TTGCCTTACAACACAACAGAGTTCATTGATGGTCTAACCTATTTAGTGAAGAACAACTTT
GTTTCAATGAGCCGAATCGACGATGCAGTTAAGAGAATTCTTAGAGTGAAGTTTCAAATG
GGACTTTTTGAGAACCCTCTAGCTGATTATAGTATGGTGAAATATCTAGGTAGCGCGGAG
CATAGAGAATTGGCTAGAGAAGCAGTGAGAAGATCACTTGTTTTATTAAAGAATGGTGCA
AATGCAGATGAACCAGTTTTACCACTTCCAAAGAAGGCATCAAGTATATTAGTTGCAGGA
ATCCATGCTAATAATATGGGCTATCAATGTGGTGGATGGACTATTACATGGCAAGGACTA
AGTGGAAATACAACAATTGGTACTACAATCCTCTCAGCCATAGAGAATACAGTTGATCCA
GAAACAAAAGTTGTGTTCAAGGAAAATCCAGATGCTGAATTCATCAAGCCCAACAACTTC
TCCTACGCCATTGTCGTGGTGGGCGAGACACCATACGCGGAAGGCTCTGGTGACACCCTA
AACTTAACAATCCCCGCACCTGGTCCGGACACCATGACTACGGTATGTGCCACGGTGAAA
TGCGTGGTCGTGCTCCTCACGGGCCGGCCAGTCGTGATTCAACCATACCTAGCTCAAGTG
GATGCACTTGTTGCAGCTTGGTTACCAGGAACAGAAGGGCAAGGTGTAGCTGATGTCTTA
TTTGGTGACTATGGTTTCACTGGTAAACTTGCTAGGACTTGGTTCAAGACTGTTGATCAA
CTCCCTATGAATGTTGGTGATTCACATTATGACCCTCTTTTCCCTTTTGGATTTGGACTG
ACCACAGAACCAACCAAGGCCTACTAA

Peptide Sequence

PEP ID

XP_016462420.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MQRIKMGFLMRILVFFCWMILTKAEYMKYKDPNKPLGRRIKDLMSRMTLEEKIGQMIQID
RTVATPEAMKKYYIGSVLSGGGSVPKKEASAENWIDMINGFQKGSLSTRLGIPMIYGIDA
VHGNNNVYKATIFPHNVGLGVTRDPQLIKKIGAATALEARATGIPYVFAPCLAVCRDPRW
GRCYESYSEDPNIVRAMSEMVPGLQGDVPSNGRLGVPFVANKQKVAACAKHYVGDGGTVK
GINENNTIIDRHGLLSIHMAGYYNSIIKGVATVMVSYSSWNGLRMHGNREMVTGFLKGTL
RFRGFVISDWAGIDKLTYPWHANYTYSILEGVNAGIDMVMLPYNTTEFIDGLTYLVKNNF
VSMSRIDDAVKRILRVKFQMGLFENPLADYSMVKYLGSAEHRELAREAVRRSLVLLKNGA
NADEPVLPLPKKASSILVAGIHANNMGYQCGGWTITWQGLSGNTTIGTTILSAIENTVDP
ETKVVFKENPDAEFIKPNNFSYAIVVVGETPYAEGSGDTLNLTIPAPGPDTMTTVCATVK
CVVVLLTGRPVVIQPYLAQVDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQ
LPMNVGDSHYDPLFPFGFGLTTEPTKAY

Transcript Sequence

Gene sequence data has not been registered.